Document that scripts is flat with no subfolders or index files

.agents/memory/imports-aliases-barrels.md

@@ -55,3 +55,20 @@ so they never reach package consumers.
 
 Relative imports inside one directory (`./sibling.ts`) are fine, with the
 `.ts` extension written out.
+
+## `scripts/` is flat (user rule, 2026-10-16)
+
+- `scripts/` has no subfolders and no `index.ts`. Barrels and `index.ts`
+  entries exist only inside `src/`; delete any `index.ts` outside it.
+- Each tool is one file, `scripts/<name>.ts`, imported directly by file:
+  `import { decorators } from "./scripts/decorators.ts";` in
+  `vite.config.ts`.
+- Code in a former `scripts/<tool>/` folder is merged or renamed into flat
+  `scripts/<name>.ts` files. Non-TS assets (HTML, images, fixtures) move to
+  where they belong (next to the tool's output, `.agents/`, or a gitignored
+  scratch dir). A subfolder that is really an app moves under `src/` as an
+  aliased folder.
+- import-check 0.10.0+ checks folder layout only where the importer or the
+  target sits in a `#`-aliased folder, so `vite.config.ts` →
+  `./scripts/x.ts` passes without any override. Remove overrides that only
+  dodged import-check.

.agents/memory/lint-overrides-policy.md

@@ -11,7 +11,9 @@ practice.
   off for `src/rules/index.ts`, the rule registry, which must import every
   rule. It is not a precedent for apps.
 - **`scripts/**`:** a narrow override is allowed when a tooling script truly
-  needs it, e.g. `no-console` in a CLI script.
+  needs it, e.g. `no-console` in a CLI script. Never one that only dodges
+  import-check (e.g. `no-relative-bypass` for `vite.config.ts`); import-check
+  ignores folders no `#` alias owns.
 - **Generated files:** list them in `ignorePatterns`, never `overrides`.
 - **Anything else needs the user's approval first.** When the user is away,
   don't add it: refactor, or leave the violation failing and log the question.

.agents/skills/migrate-deno-repo/SKILL.md

@@ -40,6 +40,9 @@ with everything.
 - [ ] Decorators stay standard with `accessor`; add `scripts/decorators.ts`
       if the repo has any. Lit repos: `scripts/lit-check.ts` + `npm run
       lit-check`.
+- [ ] `scripts/` is flat: no subfolders, no `index.ts` (barrels live only in
+      `src/`); `vite.config.ts` imports `./scripts/<name>.ts` directly. A
+      scripts subfolder that is really an app moves under `src/`.
 
 **Lint**